STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGR4Leucine-rich repeat-containing G-protein coupled receptor 4. (951 aa)    
Predicted Functional Partners:
RSPO1
R-spondin 1.
   
 0.999
RSPO2
R-spondin-2.
   
 0.984
RSPO3
R-spondin-3.
   
 0.983
RSPO4
R-spondin 4.
   
 0.976
LGR5
Leucine-rich repeat-containing G-protein coupled receptor 5.
  
0.970
ZNRF3
Zinc and ring finger 3.
    
 0.942
RNF43
E3 ubiquitin-protein ligase RNF43.
    
 0.937
LGR6
Leucine rich repeat containing G protein-coupled receptor 6.
  
0.930
NDP
Norrin cystine knot growth factor NDP.
    
 0.852
ENSCJAP00000071886
Uncharacterized protein.
   
 0.811
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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