STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOVA1RNA-binding protein Nova-1 isoform 1. (507 aa)    
Predicted Functional Partners:
PRSS53
Serine protease 53; Belongs to the peptidase S1 family.
      
 0.775
RBM11
RNA binding motif protein 11.
      
 0.775
ENSCJAP00000070769
Polypyrimidine tract binding protein 2.
    
 
 0.610
LIN7C
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
      
 0.585
TMEM63B
Transmembrane protein 63B.
      
 0.582
SRSF5
Serine and arginine rich splicing factor 5.
   
 
 0.577
RBFOX2
RNA binding protein fox-1 homolog 2 isoform 5.
      
 0.577
SRSF9
Serine/arginine-rich splicing factor 9.
    
 
 0.564
IQCJ-SCHIP1
IQCJ-SCHIP1 readthrough.
      
 0.562
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3 isoform a.
      
 0.537
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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