STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO7F-box domain-containing protein. (522 aa)    
Predicted Functional Partners:
CUL1
Cullin-1; Belongs to the cullin family.
   
 0.873
PSMF1
Proteasome inhibitor PI31 subunit.
   
 0.863
PLA2G6
Uncharacterized protein.
      
 0.832
PINK1
Serine/threonine-protein kinase PINK1, mitochondrial.
    
 
 0.829
CHCHD2
Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial.
    
 
 0.822
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
    
 
 0.811
GIGYF2
PERQ amino acid-rich with GYF domain-containing protein 2 isoform b.
   
 
 0.782
ATP13A2
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
   
  
 0.782
F6WC44_CALJA
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.744
SKP1
S-phase kinase-associated protein 1 isoform b; Belongs to the SKP1 family.
    
 0.744
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.