STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBOX1Gamma-butyrobetaine dioxygenase. (387 aa)    
Predicted Functional Partners:
ALDH9A1
4-trimethylaminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.966
ALDH1B1
Aldehyde dehydrogenase 1 family member B1; Belongs to the aldehyde dehydrogenase family.
   
 0.924
ALDH2
Aldehyde dehydrogenase, mitochondrial isoform 1; Belongs to the aldehyde dehydrogenase family.
   
 0.924
ALDH3A2
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.924
HELZ2
AAA_11 domain-containing protein.
      
 0.689
TRIML2
Tripartite motif family like 2.
      
 0.602
KCNS1
Potassium voltage-gated channel modifier subfamily S member 1; Belongs to the potassium channel family.
      
 0.569
CRYL1
Lambda-crystallin homolog.
   
 
 0.534
DECR1
2,4-dienoyl-CoA reductase 1.
   
  
 0.534
HADH
Hydroxyacyl-CoA dehydrogenase.
   
 
 0.532
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.