Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APCSPentaxin. (226 aa)    
Predicted Functional Partners:
HRG
Histidine rich glycoprotein.
   
  
 0.837
AFM
Afamin.
   
  
 0.731
FCGR2A
Uncharacterized protein.
    
 
 0.722
TTR
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
   
 
 0.713
FGB
Fibrinogen beta chain.
   
 
 0.708
C4BPB
Complement component 4 binding protein beta.
   
 
 0.681
ITIH4
Inter-alpha-trypsin inhibitor heavy chain 4.
   
  
 0.667
SLC27A2
Solute carrier family 27 member 2.
   
  
 0.663
CPB2
Carboxypeptidase B2.
   
  
 0.661
SERPINC1
Serpin family C member 1; Belongs to the serpin family.
   
  
 0.654
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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