STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF2Protein YIPF. (314 aa)    
Predicted Functional Partners:
YIPF4
Protein YIPF.
   
 
 0.737
YIPF6
Protein YIPF.
   
 
 0.706
YIPF7
Protein YIPF.
   
 
 0.621
YIPF5
Protein YIPF.
   
 
 0.621
SELENOS
Uncharacterized protein.
   
 
 0.588
YIPF3
Yip1 domain family member 3.
   
  
 0.540
GIGYF1
GRB10 interacting GYF protein 1.
      
 0.539
CDRT4
CMT1A duplicated region transcript 4.
   
 
 0.505
TVP23B
Golgi apparatus membrane protein TVP23 homolog.
   
 
 0.505
TVP23A
Golgi apparatus membrane protein TVP23 homolog.
   
 
 0.505
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.