STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCB11ATP binding cassette subfamily B member 11. (1321 aa)    
Predicted Functional Partners:
ATP8B1
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
 
 0.953
OSBPL6
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.773
CYP7A1
Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.
   
 
 0.765
SLC10A1
Solute carrier family 10 member a1.
   
  
 0.727
CROT
Peroxisomal carnitine O-octanoyltransferase isoform 2; Belongs to the carnitine/choline acetyltransferase family.
   
  
 0.716
NR1H4
Nuclear receptor subfamily 1 group H member 4.
   
 0.712
HPX
Hemopexin; Binds heme and transports it to the liver for breakdown and iron recovery, after which the free hemopexin returns to the circulation.
   
  
 0.677
NPC1
NPC intracellular cholesterol transporter 1.
   
 
 0.654
SLC51A
Solute carrier family 51 alpha subunit.
   
  
 0.641
NR0B2
Nuclear receptor subfamily 0 group B member 2.
   
 0.625
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.