STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATXN2LAtaxin-2-like protein isoform C. (1098 aa)    
Predicted Functional Partners:
ATXN2
Ataxin 2.
  
 
0.915
ATXN3
Josephin domain-containing protein.
    
 0.914
ATXN3L
Ataxin 3 like.
    
 0.914
ITPR1
Uncharacterized protein.
     
 0.911
LSM12
LSM12 homolog.
    
 
 0.893
DDX6
Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.
    
 
 0.878
SH3GL1
SH3 domain containing GRB2 like 1, endophilin A2.
    
 
 0.842
SH3GL2
SH3 domain containing GRB2 like 2, endophilin A1.
    
 
 0.811
KIFBP
KIF1-binding protein.
    
 
 0.767
G3BP2
Ras GTPase-activating protein-binding protein 2 isoform a.
   
 
 0.750
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.