STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLMNCalmin. (1005 aa)    
Predicted Functional Partners:
SPAG4
Sperm associated antigen 4.
    
 0.672
SUN5
Sad1 and UNC84 domain containing 5.
    
 0.672
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.672
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.672
NAV3
Neuron navigator 3.
   
 
 0.617
SYNE3
Spectrin repeat containing nuclear envelope family member 3.
    
 0.566
NRAP
Nebulin related anchoring protein.
      
 0.563
CCDC155
Coiled-coil domain containing 155.
    
  0.554
MYO10
Unconventional myosin-X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.542
AFAP1L2
Actin filament-associated protein 1-like 2 isoform 1.
      
 0.536
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.