STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM183ATransmembrane protein 183A. (379 aa)    
Predicted Functional Partners:
HSF2BP
Heat shock transcription factor 2 binding protein.
      
 0.828
RNF13
Ring finger protein 13.
      
 0.807
ITSN2
Intersectin 2.
     
 0.649
ENSCJAP00000078263
Uncharacterized protein.
     
 0.649
ENSCJAP00000057377
Regulating synaptic membrane exocytosis 2.
     
 0.584
DAB2
Disabled homolog 2 isoform 1.
     
 0.539
STAMBP
STAM-binding protein.
      
 0.531
PPP4R1
Protein phosphatase 4 regulatory subunit 1.
      
 0.515
NEK8
Serine/threonine-protein kinase Nek8.
      
 0.510
RPS15A
40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
      
 0.501
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.