STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKHD1L1PKHD1 like 1. (4254 aa)    
Predicted Functional Partners:
MAST4
Microtubule associated serine/threonine kinase family member 4.
      
 0.526
LOC100396974
Uncharacterized protein.
      
 0.472
FAM186A
Uncharacterized protein.
   
 
 0.451
CBLC
Cbl proto-oncogene C.
    
 0.435
CBL
E3 ubiquitin-protein ligase CBL.
    
 0.435
CBLB
Cbl proto-oncogene B.
    
 0.435
RAB39A
RAB39A, member RAS oncogene family.
    
 0.429
AP5B1
Adaptor related protein complex 5 subunit beta 1.
    
 0.418
CELSR2
Cadherin EGF LAG seven-pass G-type receptor 2; Belongs to the G-protein coupled receptor 2 family.
   
  
 0.413
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.409
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.