STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHNYNKH and NYN domain containing. (681 aa)    
Predicted Functional Partners:
F7I685_CALJA
Ubiquitin-like domain-containing protein.
    
 
 0.766
NEDD8
Ubiquitin-like domain-containing protein.
    
 
 0.766
TRIM25
Tripartite motif containing 25.
    
 
 0.713
IKBKG
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
  0.605
ZC3HAV1
Zinc finger CCCH-type containing, antiviral 1.
    
 
 0.597
CERK
Ceramide kinase.
      
 0.543
FAM171A1
Family with sequence similarity 171 member A1.
      
 0.539
CAMKK1
Calcium/calmodulin dependent protein kinase kinase 1.
      
 0.513
ADGRA3
Adhesion G protein-coupled receptor A3; Belongs to the G-protein coupled receptor 2 family.
      
 0.510
KDM6B
Lysine-specific demethylase 6B.
      
 0.483
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.