STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF7PHD finger protein 7. (380 aa)    
Predicted Functional Partners:
ASH2L
B30.2/SPRY domain-containing protein.
    
 0.684
RBBP5
Uncharacterized protein.
   
 0.680
EED
Embryonic ectoderm development.
   
 0.627
MYO19
Myosin XIX; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.624
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
   
  
 0.623
ITGB3BP
Integrin subunit beta 3 binding protein.
      
 0.620
NGLY1
N-glycanase 1.
      
 0.618
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.608
NR2C1
Nuclear receptor subfamily 2 group C member 1.
   
 0.594
SEPHS2
Selenophosphate synthetase 2.
      
 0.584
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.