STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF1BTATA-box binding protein associated factor, RNA polymerase I subunit B. (635 aa)    
Predicted Functional Partners:
TAF1A
TATA box-binding protein-associated factor RNA polymerase I subunit A isoform 1.
   
 0.978
TAF1C
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 3.
    
 0.975
TAF1D
TATA-box binding protein associated factor, RNA polymerase I subunit D.
    
 0.971
TBP
TATA-box binding protein.
    
 0.931
ENSCJAP00000068281
Uncharacterized protein.
   
 0.849
TBPL2
TATA-box binding protein like 2.
    
 0.809
RRN3
RNA polymerase I-specific transcription initiation factor RRN3.
    
 0.724
TBPL1
TATA box-binding protein-like protein 1.
    
 0.659
C11orf88
Chromosome 11 open reading frame 88.
    
 0.659
HINT2
Histidine triad nucleotide-binding protein 2, mitochondrial.
    
 0.637
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.