STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNNI3KUncharacterized protein. (835 aa)    
Predicted Functional Partners:
FPGT
Fucokinase domain-containing protein.
 
    
 0.821
TAB1
Uncharacterized protein.
   
 0.629
LRRIQ3
Leucine rich repeats and IQ motif containing 3.
    
 0.610
CD247
CD247 molecule.
   
 0.610
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
   
0.592
TNNI3
Uncharacterized protein.
   
 
 0.588
ENSCJAP00000076943
Uncharacterized protein.
   
 
 0.588
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.577
TRADD
Tumor necrosis factor receptor type 1-associated DEATH domain protein.
   
 0.547
FADD
Fas associated via death domain.
   
 0.541
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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