STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYS1Cystin 1. (173 aa)    
Predicted Functional Partners:
CTH
Cystathionine gamma-lyase isoform 1.
      
 0.549
PKHD1
PKHD1 ciliary IPT domain containing fibrocystin/polyductin.
      
 0.463
DEFA6
Defensin alpha 6.
      
 0.434
UNC119B
Protein unc-119 homolog B.
    
 0.429
NPHP3
TPR_REGION domain-containing protein.
     
 0.418
AQP2
Aquaporin 2; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
  
 0.418
AQP5
Aquaporin 5; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
  
 0.415
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.