STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADGRB2Adhesion G protein-coupled receptor B2; Belongs to the G-protein coupled receptor 2 family. (1583 aa)    
Predicted Functional Partners:
RANBP2
RAN binding protein 2.
   
 0.974
KPNB1
Karyopherin subunit beta 1.
   
 0.889
NUP153
Nuclear pore complex protein Nup153.
    
 0.819
XPOT
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 0.812
RANGAP1
Ran GTPase-activating protein 1.
   
 0.808
ENSCJAP00000067550
RanGAP1_C domain-containing protein.
   
 0.808
RANBP1
RAN binding protein 1.
   
 0.767
GCC2
GRIP and coiled-coil domain containing 2.
   
 0.767
RANGRF
Ran guanine nucleotide release factor isoform A.
    
 
 0.733
NUP50
Nuclear pore complex protein Nup50 isoform b.
   
 0.726
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.