STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTSL4ADAMTS like 4. (1067 aa)    
Predicted Functional Partners:
B3GALTL
Beta-1,3-glucosyltransferase.
     
 0.820
FBN1
Fibrillin 1.
    
 0.809
POFUT2
Uncharacterized protein.
     
 0.625
ZNF469
Zinc finger protein 469.
    
 
 0.625
GNPTG
N-acetylglucosamine-1-phosphate transferase subunit gamma.
      
 0.619
POLR3B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.612
COL9A2
Collagen type IX alpha 2 chain.
    
 
 0.574
AGK
Acylglycerol kinase, mitochondrial.
      
 0.567
LTBP2
Latent transforming growth factor beta binding protein 2.
    
 0.546
P3H2
Prolyl 3-hydroxylase 2.
      
 0.544
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.