STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTSL4ADAMTS like 4. (1067 aa)    
Predicted Functional Partners:
FBN1
Fibrillin 1.
    
 0.812
B3GALTL
Beta-1,3-glucosyltransferase.
     
 0.785
GNPTG
N-acetylglucosamine-1-phosphate transferase subunit gamma.
      
 0.695
SUOX
Sulfite oxidase.
      
 0.643
P3H2
Prolyl 3-hydroxylase 2.
      
 0.632
ZNF469
Zinc finger protein 469.
    
 
 0.628
POLR3B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.620
POFUT2
Uncharacterized protein.
     
 0.580
LTBP2
Latent transforming growth factor beta binding protein 2.
   
 0.551
MFAP4
Fibrinogen C-terminal domain-containing protein.
   
  
 0.530
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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