STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STAB1Stabilin 1. (2572 aa)    
Predicted Functional Partners:
FHOD1
Formin homology 2 domain containing 1.
      
 0.789
SPARC
Secreted protein acidic and cysteine rich.
   
 
 0.724
APOB
Apolipoprotein B.
   
 
 0.698
SKAP1
Src kinase associated phosphoprotein 1.
   
  
 0.576
LYVE1
Lymphatic vessel endothelial hyaluronan receptor 1.
   
0.570
FIG4
FIG4 phosphoinositide 5-phosphatase.
      
 0.565
SPARCL1
SPARC like 1.
   
 
 0.553
CD163
Scavenger receptor cysteine-rich type 1 protein M130 isoform a.
   
 
 0.544
STAU1
Uncharacterized protein.
      
 0.542
CD47
CD47 molecule.
   
  
 0.538
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.