STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX41Putative ATP-dependent RNA helicase DDX41. (622 aa)    
Predicted Functional Partners:
TRIM21
E3 ubiquitin-protein ligase TRIM21.
    
 0.911
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
 0.819
CGAS
Cyclic GMP-AMP synthase.
      
 0.790
TBK1
TANK binding kinase 1.
    
 0.767
DHX9
DExH-box helicase 9.
    
 0.764
NKAP
NF-kappa-B-activating protein.
    
  0.745
DHX36
DEAH-box helicase 36.
   
 0.732
IRF3
Interferon regulatory factor 3 isoform 1.
   
 0.708
DHX38
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
   
 0.704
CDC40
Cell division cycle 40.
    
 0.701
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.