STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTB4R2Leukotriene B4 receptor 2. (389 aa)    
Predicted Functional Partners:
LTB4R
Leukotriene B4 receptor; Belongs to the G-protein coupled receptor 1 family.
     
0.920
GNA15
Guanine nucleotide-binding protein subunit alpha-15.
    
  0.784
GNAQ
Guanine nucleotide-binding protein G(Q) subunit alpha.
    
 0.756
GNA11
G protein subunit alpha 11.
    
 0.756
GNA14
Uncharacterized protein.
    
 0.756
DCD
Dermcidin.
      
 0.564
LTA4H
Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.
      
 0.551
LTC4S
Leukotriene C4 synthase.
      
 0.527
PTGER3
Prostaglandin E2 receptor EP3 subtype isoform 4.
      
 0.523
RANBP10
RAN binding protein 10.
    
 
 0.513
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.