STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM13ARho-GAP domain-containing protein. (1023 aa)    
Predicted Functional Partners:
HHIP
Hedgehog-interacting protein.
    
 
 0.794
MYPN
Myopalladin isoform a.
     
 0.791
GSTCD
Glutathione S-transferase C-terminal domain containing.
      
 0.775
RIN3
Ras and Rab interactor 3.
   
  
 0.774
HERC4
HECT and RLD domain containing E3 ubiquitin protein ligase 4.
      
 0.744
IREB2
Iron-responsive element-binding protein 2; Belongs to the aconitase/IPM isomerase family.
      
 0.682
HERC3
Putative E3 ubiquitin-protein ligase HERC3 isoform 1.
      
 0.629
CHRNA5
Cholinergic receptor nicotinic alpha 5 subunit.
      
 0.611
EEFSEC
Eukaryotic elongation factor, selenocysteine-tRNA specific.
      
 0.589
EGLN2
Egl-9 family hypoxia inducible factor 2.
      
 0.581
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.