CIDEB protein (Callithrix jacchus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

CIDEB

Cell death inducing DFFA like effector b. (220 aa)

Predicted Functional Partners:

APOB

0.953

KLHL12

0.849

DFFA

0.728

TM6SF2

0.700

CIDEA

0.636

ABCG4

0.590

LTBR

0.586

LAMP1

0.584

LTB4R2

0.576

MAPK15

0.576

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCG4	CIDEB	ENSCJAP00000025676	ENSCJAP00000012306	ATP-binding cassette sub-family G member 4.	Cell death inducing DFFA like effector b.	0.590
ABCG4	LTB4R2	ENSCJAP00000025676	ENSCJAP00000012268	ATP-binding cassette sub-family G member 4.	Leukotriene B4 receptor 2.	0.489
ABCG4	MAPK15	ENSCJAP00000025676	ENSCJAP00000050687	ATP-binding cassette sub-family G member 4.	Mitogen-activated protein kinase.	0.684
APOB	CIDEB	ENSCJAP00000014061	ENSCJAP00000012306	Apolipoprotein B.	Cell death inducing DFFA like effector b.	0.953
APOB	TM6SF2	ENSCJAP00000014061	ENSCJAP00000060921	Apolipoprotein B.	Transmembrane 6 superfamily member 2.	0.537
CIDEA	CIDEB	ENSCJAP00000008796	ENSCJAP00000012306	Cell death inducing DFFA like effector a.	Cell death inducing DFFA like effector b.	0.636
CIDEB	ABCG4	ENSCJAP00000012306	ENSCJAP00000025676	Cell death inducing DFFA like effector b.	ATP-binding cassette sub-family G member 4.	0.590
CIDEB	APOB	ENSCJAP00000012306	ENSCJAP00000014061	Cell death inducing DFFA like effector b.	Apolipoprotein B.	0.953
CIDEB	CIDEA	ENSCJAP00000012306	ENSCJAP00000008796	Cell death inducing DFFA like effector b.	Cell death inducing DFFA like effector a.	0.636
CIDEB	DFFA	ENSCJAP00000012306	ENSCJAP00000009270	Cell death inducing DFFA like effector b.	DNAation factor subunit alpha isoform 1.	0.728
CIDEB	KLHL12	ENSCJAP00000012306	ENSCJAP00000011524	Cell death inducing DFFA like effector b.	Kelch like family member 12.	0.849
CIDEB	LAMP1	ENSCJAP00000012306	ENSCJAP00000055138	Cell death inducing DFFA like effector b.	Lysosomal associated membrane protein 1.	0.584
CIDEB	LTB4R2	ENSCJAP00000012306	ENSCJAP00000012268	Cell death inducing DFFA like effector b.	Leukotriene B4 receptor 2.	0.576
CIDEB	LTBR	ENSCJAP00000012306	ENSCJAP00000001218	Cell death inducing DFFA like effector b.	Lymphotoxin beta receptor.	0.586
CIDEB	MAPK15	ENSCJAP00000012306	ENSCJAP00000050687	Cell death inducing DFFA like effector b.	Mitogen-activated protein kinase.	0.576
CIDEB	TM6SF2	ENSCJAP00000012306	ENSCJAP00000060921	Cell death inducing DFFA like effector b.	Transmembrane 6 superfamily member 2.	0.700
DFFA	CIDEB	ENSCJAP00000009270	ENSCJAP00000012306	DNAation factor subunit alpha isoform 1.	Cell death inducing DFFA like effector b.	0.728
KLHL12	CIDEB	ENSCJAP00000011524	ENSCJAP00000012306	Kelch like family member 12.	Cell death inducing DFFA like effector b.	0.849
KLHL12	TM6SF2	ENSCJAP00000011524	ENSCJAP00000060921	Kelch like family member 12.	Transmembrane 6 superfamily member 2.	0.772
LAMP1	CIDEB	ENSCJAP00000055138	ENSCJAP00000012306	Lysosomal associated membrane protein 1.	Cell death inducing DFFA like effector b.	0.584