Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FAM8A1Protein FAM8A1. (413 aa)    
Predicted Functional Partners:
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 
 0.939
SYVN1
E3 ubiquitin-protein ligase synoviolin isoform b.
    
 0.938
OS9
Protein OS-9 isoform 1.
    
 0.934
UBE2J1
Ubiquitin-conjugating enzyme E2 J1.
     
 0.822
RNF126
RING finger protein 126.
   
 
 0.810
ERLEC1
Endoplasmic reticulum lectin 1 isoform 1.
    
 
 0.784
AGPAT5
1-acylglycerol-3-phosphate O-acyltransferase 5.
      
 0.783
RNF170
E3 ubiquitin-protein ligase RNF170 isoform a.
      
 0.772
SEL1L2
SEL1L2 adaptor subunit of ERAD E3 ligase.
    
 
 0.742
AGPAT4
1-acyl-sn-glycerol-3-phosphate acyltransferase delta.
      
 0.732
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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