STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR38WD repeat domain 38. (310 aa)    
Predicted Functional Partners:
RBBP5
Uncharacterized protein.
   
 0.693
ASH2L
B30.2/SPRY domain-containing protein.
   
 0.689
FAM131C
Family with sequence similarity 131 member C.
      
 0.686
GCC2
GRIP and coiled-coil domain containing 2.
   
 0.680
BOD1L1
Biorientation of chromosomes in cell division 1 like 1.
   
 0.657
CXXC1
CpG-binding protein isoform 1.
    
 0.655
WDR82
WD repeat-containing protein 82.
   
 0.654
ANKRD12
Ankyrin repeat domain-containing protein 12 isoform 1.
    
 0.645
LRRIQ1
Leucine rich repeats and IQ motif containing 1.
   
 0.639
BOLA2B
BolA-like protein 2; Belongs to the BolA/IbaG family.
   
 
 0.636
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.