STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDE4APhosphodiesterase. (878 aa)    
Predicted Functional Partners:
DISC1
Disrupted in schizophrenia 1 protein isoform L.
    
 
 0.865
PRKACB
cAMP-dependent protein kinase catalytic subunit beta isoform 1; Belongs to the protein kinase superfamily.
   
 0.780
AKAP6
A-kinase anchoring protein 6.
    
 
 0.734
HCN2
Hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2.
    
 
 0.710
LOC100408115
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 0.689
PRKACG
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 0.689
PRKACA
cAMP-dependent protein kinase catalytic subunit alpha isoform 1; Belongs to the protein kinase superfamily.
   
 0.688
ALDH7A1
Aldehyde dehydrogenase 7 family member A1; Belongs to the aldehyde dehydrogenase family.
      
 0.644
AKAP1
A-kinase anchoring protein 1.
      
 0.644
ARRB1
Arrestin beta 1.
    
 
 0.624
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.