STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CORO1ACoronin; Belongs to the WD repeat coronin family. (461 aa)    
Predicted Functional Partners:
ARHGAP30
Rho GTPase activating protein 30.
   
  
 0.786
LAPTM5
Lysosomal-associated transmembrane protein 5.
   
  
 0.764
STXBP2
Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.
   
  
 0.692
WAS
WASP actin nucleation promoting factor.
   
 
 0.687
TYROBP
TYRO protein tyrosine kinase binding protein.
   
  
 0.682
DHX40
Putative ATP-dependent RNA helicase DHX40 isoform 1.
      
 0.633
DUT
Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial isoform 1.
      0.633
FPGS
Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.
    
 0.626
ARHGAP4
Rho GTPase activating protein 4 (Predicted).
   
  
 0.615
ACTR2
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
   
 
 0.604
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.