STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NINNinein. (2134 aa)    
Predicted Functional Partners:
CEP170
Centrosomal protein 170.
    
 0.929
CCDC68
Coiled-coil domain containing 68.
    
 0.928
CCDC120
Coiled-coil domain containing 120.
    
 0.892
CEP128
Centrosomal protein 128.
   
 
 0.876
CEP164
Centrosomal protein 164.
    
 0.836
CNTRL
Centriolin.
   
 
 0.833
SCLT1
Sodium channel and clathrin linker 1.
    
 0.814
CEP250
Centrosomal protein 250.
    
 
 0.804
SPICE1
Uncharacterized protein.
      
 0.803
ARHGEF1
Rho guanine nucleotide exchange factor 1.
      
 0.790
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.