STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQSEC3IQ motif and Sec7 domain 3. (1186 aa)    
Predicted Functional Partners:
C15orf59
Inhibitory synaptic factor 1.
      
 0.918
TMEM236
Transmembrane protein 236.
      
 0.917
MYCBP2
MYC binding protein 2.
      
 0.777
RBMS3
RNA binding motif single stranded interacting protein 3.
      
 0.763
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.705
NEGR1
Neuronal growth regulator 1.
   
 
 0.636
IKZF1
IKAROS family zinc finger 1.
      
 0.623
KCNMA1
Potassium calcium-activated channel subfamily M alpha 1.
      
 0.621
RBM43
RNA binding motif protein 43.
      
 0.614
RBFOX3
RNA binding protein fox-1 homolog 3; RNA-binding protein that regulates alternative splicing events.
   
 
 0.598
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.