Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM234Transmembrane protein 234. (162 aa)    
Predicted Functional Partners:
TMEM63C
Transmembrane protein 63C.
      
 0.585
SLC35E4
Solute carrier family 35 member E4.
      
 0.553
TMEM241
Transmembrane protein 241.
      
 0.552
CCDC28B
Coiled-coil domain-containing protein 28B.
      
 0.484
ZNF185
Zinc finger protein 185 with LIM domain.
      
 0.482
RABGEF1
Rab5 GDP/GTP exchange factor.
      
 0.466
RAPGEF2
Rap guanine nucleotide exchange factor 2.
      
 0.427
TCP11L2
T-complex protein 11-like protein 2.
      
 0.410
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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