STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGALSLUncharacterized protein. (365 aa)    
Predicted Functional Partners:
CASTOR2
GATS-like protein 2.
      
 0.806
MRS2
Magnesium transporter.
      
 0.775
LINGO2
Leucine rich repeat and Ig domain containing 2.
   
  
 0.774
UBASH3B
Ubiquitin associated and SH3 domain containing B.
      
 0.717
F6PY39_CALJA
PDZ and LIM domain 5.
      
 0.700
FLRT2
Fibronectin leucine rich transmembrane protein 2.
   
  
 0.696
ACTR3B
Uncharacterized protein; Belongs to the actin family.
      
 0.694
CDH24
Cadherin-24 isoform 2; Cadherins are calcium-dependent cell adhesion proteins.
     
 0.676
TFB2M
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
      
 0.590
DPP6
Dipeptidyl aminopeptidase-like protein 6 isoform 1; Belongs to the peptidase S9B family.
    
 
 0.588
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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