STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSSK4Testis specific serine kinase 4. (339 aa)    
Predicted Functional Partners:
ACTRT2
Actin related protein T2; Belongs to the actin family.
    
 
 0.904
H1-6
Histone cluster 1 H1 family member t.
   
  
 0.738
PRKAB1
Protein kinase AMP-activated non-catalytic subunit beta 1.
    
 0.735
SPESP1
Sperm equatorial segment protein 1.
      
 0.731
ODF1
Outer dense fiber of sperm tails 1.
   
  
 0.654
GAPDHS
Glyceraldehyde-3-phosphate dehydrogenase.
   
  
 0.638
AKAP4
A-kinase anchoring protein 4.
   
  
 0.627
ODF2
Outer dense fiber of sperm tails 2.
   
 0.626
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 
 0.589
SPACA1
Sperm acrosome associated 1.
    
 
 0.574
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.