STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMCO3Transmembrane and coiled-coil domains 3. (720 aa)    
Predicted Functional Partners:
NQO2
N-ribosyldihydronicotinamide:quinone reductase 2.
  
 
 0.714
NQO1
Flavodoxin_2 domain-containing protein.
  
 
 0.714
TREH
Trehalase.
      
 0.645
YIPF6
Protein YIPF.
      
 0.644
MSRA
Methionine sulfoxide reductase A.
     
 0.579
GTPBP6
GTP binding protein 6 (putative).
     
 0.576
PCID2
PCI domain containing 2.
      
 0.568
OCA2
OCA2 melanosomal transmembrane protein.
     
 0.554
SOD2
Superoxide dismutase [Mn], mitochondrial; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
     
 0.552
RIMKLA
Ribosomal modification protein rimK like family member A.
     
 0.550
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.