RTRAF protein (Callithrix jacchus) - STRING interaction network

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Score

RTRAF

RNA transcription, translation and transport factor. (244 aa)

Predicted Functional Partners:

RTCB

0.986

C2orf49

0.982

FAM98B

0.982

DDX1

0.981

ENSCJAP00000068556

0.954

FAM98C

0.879

ZBTB8OS

0.809

SLFNL1

0.778

LSM12

0.745

PSMB1

0.688

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C2orf49	DDX1	ENSCJAP00000014988	ENSCJAP00000013408	Chromosome 2 open reading frame 49.	ATP-dependent RNA helicase DDX1.	0.975
C2orf49	ENSCJAP00000068556	ENSCJAP00000014988	ENSCJAP00000068556	Chromosome 2 open reading frame 49.	Uncharacterized protein.	0.809
C2orf49	FAM98B	ENSCJAP00000014988	ENSCJAP00000039035	Chromosome 2 open reading frame 49.	Family with sequence similarity 98 member B.	0.987
C2orf49	FAM98C	ENSCJAP00000014988	ENSCJAP00000025073	Chromosome 2 open reading frame 49.	Family with sequence similarity 98 member C.	0.573
C2orf49	RTCB	ENSCJAP00000014988	ENSCJAP00000011386	Chromosome 2 open reading frame 49.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.985
C2orf49	RTRAF	ENSCJAP00000014988	ENSCJAP00000012877	Chromosome 2 open reading frame 49.	RNA transcription, translation and transport factor.	0.982
C2orf49	ZBTB8OS	ENSCJAP00000014988	ENSCJAP00000053471	Chromosome 2 open reading frame 49.	Zinc finger and BTB domain containing 8 opposite strand.	0.842
DDX1	C2orf49	ENSCJAP00000013408	ENSCJAP00000014988	ATP-dependent RNA helicase DDX1.	Chromosome 2 open reading frame 49.	0.975
DDX1	ENSCJAP00000068556	ENSCJAP00000013408	ENSCJAP00000068556	ATP-dependent RNA helicase DDX1.	Uncharacterized protein.	0.976
DDX1	FAM98B	ENSCJAP00000013408	ENSCJAP00000039035	ATP-dependent RNA helicase DDX1.	Family with sequence similarity 98 member B.	0.994
DDX1	FAM98C	ENSCJAP00000013408	ENSCJAP00000025073	ATP-dependent RNA helicase DDX1.	Family with sequence similarity 98 member C.	0.757
DDX1	LSM12	ENSCJAP00000013408	ENSCJAP00000065918	ATP-dependent RNA helicase DDX1.	LSM12 homolog.	0.401
DDX1	RTCB	ENSCJAP00000013408	ENSCJAP00000011386	ATP-dependent RNA helicase DDX1.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.992
DDX1	RTRAF	ENSCJAP00000013408	ENSCJAP00000012877	ATP-dependent RNA helicase DDX1.	RNA transcription, translation and transport factor.	0.981
DDX1	ZBTB8OS	ENSCJAP00000013408	ENSCJAP00000053471	ATP-dependent RNA helicase DDX1.	Zinc finger and BTB domain containing 8 opposite strand.	0.837
ENSCJAP00000068556	C2orf49	ENSCJAP00000068556	ENSCJAP00000014988	Uncharacterized protein.	Chromosome 2 open reading frame 49.	0.809
ENSCJAP00000068556	DDX1	ENSCJAP00000068556	ENSCJAP00000013408	Uncharacterized protein.	ATP-dependent RNA helicase DDX1.	0.976
ENSCJAP00000068556	FAM98B	ENSCJAP00000068556	ENSCJAP00000039035	Uncharacterized protein.	Family with sequence similarity 98 member B.	0.954
ENSCJAP00000068556	FAM98C	ENSCJAP00000068556	ENSCJAP00000025073	Uncharacterized protein.	Family with sequence similarity 98 member C.	0.556
ENSCJAP00000068556	LSM12	ENSCJAP00000068556	ENSCJAP00000065918	Uncharacterized protein.	LSM12 homolog.	0.698