STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEK4NIMA related kinase 4. (780 aa)    
Predicted Functional Partners:
DLGAP5
DLG associated protein 5.
   
  
 0.784
RPGRIP1L
RPGRIP1 like.
   
 
 0.778
CMC2
COX assembly mitochondrial protein.
      
 0.777
BEND2
BEN domain containing 2.
      
 0.775
CD55
Uncharacterized protein.
    
 0.717
ZNF394
Zinc finger protein 394.
     
 0.712
SETBP1
SET binding protein 1.
    
 0.695
USP19
Ubiquitin specific peptidase 19.
      
 0.671
MTMR3
Myotubularin-related protein 3 isoform c.
   
   0.644
CDC25A
M-phase inducer phosphatase 1 isoform a.
   
 0.642
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.