STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEK4NIMA related kinase 4. (780 aa)    
Predicted Functional Partners:
SPAG17
Uncharacterized protein.
    
 
 0.731
SPINK2
Serine peptidase inhibitor, Kazal type 2.
      
 0.718
BEND2
BEN domain containing 2.
      
 0.682
CMC2
COX assembly mitochondrial protein.
      
 0.674
CD55
Uncharacterized protein.
    
 
 0.643
PPP1CA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.631
RPGRIP1L
RPGRIP1 like.
   
 
 0.610
ZNF394
Zinc finger protein 394.
      
 0.610
USP19
Ubiquitin specific peptidase 19.
      
 0.597
DLGAP5
DLG associated protein 5.
   
  
 0.597
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.