STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MZB1Marginal zone B and B1 cell specific protein. (189 aa)    
Predicted Functional Partners:
TNFRSF17
BCMA-Tall_bind domain-containing protein.
   
  
 0.828
TNFRSF17-2
TNF receptor superfamily member 17.
   
  
 0.828
JCHAIN
Uncharacterized protein.
   
  
 0.824
POU2AF1
POU class 2 homeobox associating factor 1.
   
  
 0.790
MS4A1
CD20.
   
  
 0.656
IGHA1
Immunoglobulin heavy constant alpha 1.
   
  
 0.639
DERL3
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
   
  
 0.628
TCL1A
T cell leukemia/lymphoma 1A.
      
 0.613
IGHM
Immunoglobulin heavy constant mu.
   
  
 0.602
CD79A
CD79a molecule.
   
  
 0.587
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.