MESP2 protein (Callithrix jacchus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

MESP2

Uncharacterized protein. (99 aa)

Predicted Functional Partners:

TBX6

0.918

TCF4

0.868

TCF3

0.866

TCF12

0.858

ENSCJAP00000056719

0.786

DLL3

0.720

RIPPLY1

0.659

TCIM

0.604

HES7

0.580

DLL1

0.522

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DLL1	DLL3	ENSCJAP00000069799	ENSCJAP00000061861	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Delta like canonical Notch ligand 3.	0.917
DLL1	ENSCJAP00000056719	ENSCJAP00000069799	ENSCJAP00000056719	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Beta-1,3-N-acetylglucosaminyltransferase.	0.649
DLL1	MESP2	ENSCJAP00000069799	ENSCJAP00000013151	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Uncharacterized protein.	0.522
DLL1	TBX6	ENSCJAP00000069799	ENSCJAP00000012659	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Uncharacterized protein.	0.531
DLL3	DLL1	ENSCJAP00000061861	ENSCJAP00000069799	Delta like canonical Notch ligand 3.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.917
DLL3	ENSCJAP00000056719	ENSCJAP00000061861	ENSCJAP00000056719	Delta like canonical Notch ligand 3.	Beta-1,3-N-acetylglucosaminyltransferase.	0.764
DLL3	MESP2	ENSCJAP00000061861	ENSCJAP00000013151	Delta like canonical Notch ligand 3.	Uncharacterized protein.	0.720
DLL3	TBX6	ENSCJAP00000061861	ENSCJAP00000012659	Delta like canonical Notch ligand 3.	Uncharacterized protein.	0.534
ENSCJAP00000056719	DLL1	ENSCJAP00000056719	ENSCJAP00000069799	Beta-1,3-N-acetylglucosaminyltransferase.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.649
ENSCJAP00000056719	DLL3	ENSCJAP00000056719	ENSCJAP00000061861	Beta-1,3-N-acetylglucosaminyltransferase.	Delta like canonical Notch ligand 3.	0.764
ENSCJAP00000056719	HES7	ENSCJAP00000056719	ENSCJAP00000026872	Beta-1,3-N-acetylglucosaminyltransferase.	Transcription factor HES-7 isoform 2.	0.539
ENSCJAP00000056719	MESP2	ENSCJAP00000056719	ENSCJAP00000013151	Beta-1,3-N-acetylglucosaminyltransferase.	Uncharacterized protein.	0.786
ENSCJAP00000056719	TBX6	ENSCJAP00000056719	ENSCJAP00000012659	Beta-1,3-N-acetylglucosaminyltransferase.	Uncharacterized protein.	0.557
HES7	ENSCJAP00000056719	ENSCJAP00000026872	ENSCJAP00000056719	Transcription factor HES-7 isoform 2.	Beta-1,3-N-acetylglucosaminyltransferase.	0.539
HES7	MESP2	ENSCJAP00000026872	ENSCJAP00000013151	Transcription factor HES-7 isoform 2.	Uncharacterized protein.	0.580
HES7	TBX6	ENSCJAP00000026872	ENSCJAP00000012659	Transcription factor HES-7 isoform 2.	Uncharacterized protein.	0.842
MESP2	DLL1	ENSCJAP00000013151	ENSCJAP00000069799	Uncharacterized protein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.522
MESP2	DLL3	ENSCJAP00000013151	ENSCJAP00000061861	Uncharacterized protein.	Delta like canonical Notch ligand 3.	0.720
MESP2	ENSCJAP00000056719	ENSCJAP00000013151	ENSCJAP00000056719	Uncharacterized protein.	Beta-1,3-N-acetylglucosaminyltransferase.	0.786
MESP2	HES7	ENSCJAP00000013151	ENSCJAP00000026872	Uncharacterized protein.	Transcription factor HES-7 isoform 2.	0.580