STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MESP2Uncharacterized protein. (99 aa)    
Predicted Functional Partners:
TBX6
Uncharacterized protein.
    
 0.834
ENSCJAP00000056719
Beta-1,3-N-acetylglucosaminyltransferase.
      
 0.761
TCIM
Transcriptional and immune response regulator.
      
 0.686
TCF4
Transcription factor 4.
   
 0.666
TCF3
Transcription factor 3.
   
 0.663
TCF12
Transcription factor 12 isoform a.
   
 0.641
DLL3
Delta like canonical Notch ligand 3.
    
 
 0.608
RIPPLY1
Ripply transcriptional repressor 1.
      
 0.542
HOXB6
Homeobox protein Hox-B6.
   
 
 0.519
GATA6
GATA binding protein 6.
   
 0.517
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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