STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MINDY1MINDY lysine 48 deubiquitinase 1. (468 aa)    
Predicted Functional Partners:
ENSCJAP00000059313
Uncharacterized protein.
    
 
 0.805
UBA52
Ubiquitin-like domain-containing protein.
   
   0.795
UBC
Uncharacterized protein.
    
 
 0.730
LOC100411827
Ubiquitin-like domain-containing protein.
   
   0.725
ENSCJAP00000060911
Ubiquitin-like domain-containing protein.
   
   0.643
DENND4C
DENN domain containing 4C.
      
 0.564
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
      
 0.557
WHAMM
WASP homolog associated with actin, golgi membranes and microtubules.
      
 0.553
SETD3
Actin-histidine N-methyltransferase; Protein-histidine N-methyltransferase that specifically mediates methylation of actin at 'His-73'. Histidine methylation of actin is required for smooth muscle contraction of the laboring uterus during delivery. Does not have protein-lysine N-methyltransferase activity and probably only catalyzes histidine methylation of actin.
    
 0.549
MMUT
Methylmalonyl-CoA mutase.
    
 0.549
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.