STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD13Potassium channel tetramerization domain containing 13. (411 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
    
 
 0.947
FAF1
FAS-associated factor 1.
    
 
 0.941
RND2
Rho-related GTP-binding protein RhoN.
    
 0.918
CUL3
Cullin-3 isoform 1; Belongs to the cullin family.
    
 0.878
KCTD10
Potassium channel tetramerization domain containing 10.
  
 
 
0.776
TNFAIP1
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2.
  
 
 
0.769
UBXN1
UBX domain protein 1.
   
 
 0.645
USP25
Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family.
    
 
 0.626
ASPHD2
Aspartate beta-hydroxylase domain containing 2.
      
 0.617
WDFY3
WD repeat and FYVE domain containing 3.
      
 0.613
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.