STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UNC50Unc-50 inner nuclear membrane RNA binding protein. (276 aa)    
Predicted Functional Partners:
ARFRP1
ADP-ribosylation factor-related protein 1 isoform a.
    
 
 0.802
SLC35A2
UDP-galactose translocator isoform a.
   
  
 0.699
TM9SF2
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.657
RIC3
RIC3 acetylcholine receptor chaperone.
      
 0.645
SPTSSA
Serine palmitoyltransferase small subunit A.
      
 0.615
B4GALT5
Uncharacterized protein.
      
 0.610
TMX3
Thioredoxin related transmembrane protein 3.
      
 0.596
UGCG
Ceramide glucosyltransferase.
      
 0.585
PIGZ
Mannosyltransferase.
      
 0.561
AKAP17A
A-kinase anchoring protein 17A.
      
 0.550
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.