Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAGR1PAXIP1 associated glutamate rich protein 1. (254 aa)    
Predicted Functional Partners:
PAXIP1
PAX interacting protein 1.
    
 0.992
KDM6A
Lysine demethylase 6A.
    
 0.976
NCOA6
Nuclear receptor coactivator 6 isoform 1.
    
 0.964
RBBP5
Uncharacterized protein.
    
 0.959
MDC1
Mediator of DNA damage checkpoint 1.
    
 0.949
WDR5
WD repeat-containing protein 5.
    
 0.945
KMT2C
Lysine methyltransferase 2C.
    
 0.943
ASH2L
B30.2/SPRY domain-containing protein.
    
 0.941
ENSCJAP00000074992
Uncharacterized protein.
    
 0.921
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.910
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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