STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRRT2Proline-rich transmembrane protein 2 isoform 2. (384 aa)    
Predicted Functional Partners:
C2CD2L
C2CD2 like.
    
 
 0.895
DIRAS2
GTP-binding protein Di-Ras2.
   
 0.795
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform a.
    
 0.780
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.778
PNKD
PNKD metallo-beta-lactamase domain containing.
      
 0.644
METTL3
N6-adenosine-methyltransferase 70 kDa subunit; Belongs to the MT-A70-like family.
    
 
 0.628
SV2A
Synaptic vesicle glycoprotein 2A.
   
 
 0.602
SCN2A
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
   
 
 0.583
TGM6
Transglutaminase 6.
      
 0.575
SCN1A
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
   
 
 0.545
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.