STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JMJD1CJumonji domain containing 1C. (2540 aa)    
Predicted Functional Partners:
PEAR1
Platelet endothelial aggregation receptor 1.
      
 0.725
KDM4B
Lysine demethylase 4B.
     
 0.699
KDM4C
Lysine-specific demethylase 4C isoform 1.
     
 0.601
NIPBL
Nipped-B protein.
   
  
 0.597
MRVI1
Murine retrovirus integration site 1 homolog.
      
 0.581
THRB
Uncharacterized protein.
   
 0.559
REEP3
Receptor expression-enhancing protein.
      
 0.551
KDM4A
Lysine-specific demethylase 4A.
     
 0.548
KDM7A
Lysine demethylase 7A.
   
 
 0.537
KMT2E
Histone-lysine N-methyltransferase MLL5.
   
  
 0.503
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.