STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIMD4T cell immunoglobulin and mucin domain containing 4. (375 aa)    
Predicted Functional Partners:
SGCD
Delta-sarcoglycan isoform 1.
      
 0.800
PPP1R11
Protein phosphatase 1 regulatory inhibitor subunit 11.
      
 0.732
SETD4
SET domain-containing protein 4 isoform 1.
      
 0.727
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.684
ST6GAL2
Beta-galactoside alpha-2,6-sialyltransferase 2 isoform a; Belongs to the glycosyltransferase 29 family.
    
 0.684
SLC5A7
High affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
  
 0.680
LGALS9
Galectin.
   
 0.672
PPP1R10
Protein phosphatase 1 regulatory subunit 10.
    
 0.662
PPP1R8
Nuclear inhibitor of protein phosphatase 1 isoform alpha.
      
 0.648
PCDH9
Protocadherin 9.
    
 0.630
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.