STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM164Transmembrane protein 164 isoform b. (297 aa)    
Predicted Functional Partners:
TMEM132A
Transmembrane protein 132A.
      
 0.771
TMEM62
Transmembrane protein 62.
      
 0.770
CDHR2
Cadherin related family member 2.
      
 0.769
PALLD
Palladin, cytoskeletal associated protein.
      
 0.620
TMEM40
Transmembrane protein 40.
      
 0.620
KRT20
Keratin 20; Belongs to the intermediate filament family.
      
 0.588
THBS3
Thrombospondin-3 isoform 1.
      
 0.581
SERTM1
Serine-rich and transmembrane domain-containing protein 1.
      
 0.574
TMEM14A
Transmembrane protein 14A.
      
 0.562
FAM91A1
Family with sequence similarity 91 member A1.
      
 0.545
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.