STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMOD4Tropomodulin 4 (Predicted). (345 aa)    
Predicted Functional Partners:
ADD1
Alpha-adducin isoform b.
    
 
 0.880
NEB
Nebulin.
   
 0.875
ADD2
Beta-adducin isoform a.
    
 
 0.860
ADD3
Adducin 3.
    
 
 0.852
MYL1
Myosin light chain 1.
   
 
 0.711
MYO18B
Myosin XVIIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.695
BFSP1
Beaded filament structural protein 1; Belongs to the intermediate filament family.
      
 0.689
ACTN3
Actinin alpha 3 (gene/pseudogene).
   
 
 0.680
CARMIL1
Capping protein regulator and myosin 1 linker 1.
      
 0.644
STAC3
SH3 and cysteine rich domain 3.
   
  
 0.642
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.