STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGRRF1Cell growth regulator with RING finger domain protein 1. (332 aa)    
Predicted Functional Partners:
RNF130
E3 ubiquitin-protein ligase RNF130.
     
 0.793
RNF145
Ring finger protein 145.
    
 
 0.790
RNFT1
Ring finger protein, transmembrane 1.
      
 0.788
RNF121
RING finger protein 121.
      
 0.773
RNF170
E3 ubiquitin-protein ligase RNF170 isoform a.
      
 0.745
ZNRF4
Zinc and ring finger 4.
    
 
 0.681
RNF19B
RBR-type E3 ubiquitin transferase.
   
 
 0.650
RNF19A
RBR-type E3 ubiquitin transferase.
   
 
 0.648
RNF149
E3 ubiquitin-protein ligase RNF149.
     
 0.641
RNF103
E3 ubiquitin-protein ligase RNF103 isoform 1.
     
 0.591
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.