STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC23Leucine rich repeat containing 23. (343 aa)    
Predicted Functional Partners:
LPHN1
Adhesion G protein-coupled receptor L1; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.719
ADGRL2
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.719
ADGRL3
Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.719
CCDC113
Coiled-coil domain containing 113.
   
  
 0.616
CFAP161
Cilia and flagella associated protein 161.
   
 0.610
DLEC1
DLEC1 cilia and flagella associated protein.
   
 0.610
CFAP52
Cilia and flagella associated protein 52.
   
 0.586
CCDC40
Coiled-coil domain containing 40.
   
 
 0.577
LRRC34
Leucine rich repeat containing 34.
   
  
 0.574
CCDC146
Coiled-coil domain containing 146.
    
 0.568
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.