STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC23Leucine rich repeat containing 23. (343 aa)    
Predicted Functional Partners:
CFAP57
Cilia and flagella associated protein 57.
   
 0.901
MLF2
Myeloid leukemia factor 2.
   
  
 0.846
ENO2
Gamma-enolase.
 
 
 
 0.836
DNAI1
Dynein axonemal intermediate chain 1.
   
 
 0.834
COPS7A
COP9 signalosome complex subunit 7a.
     
 0.833
GPR162
Putative G-protein coupled receptor 162 isoform 2.
    
 
 0.833
PIANP
PILR alpha-associated neural protein isoform a.
   
  
 0.830
SPSB2
SPRY domain-containing SOCS box protein 2.
     
 0.827
USP5
Ubiquitin carboxyl-terminal hydrolase.
      
 0.825
CDCA3
Cell division cycle-associated protein 3.
      
 0.816
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.