STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALCOCO2Calcium binding and coiled-coil domain 2. (446 aa)    
Predicted Functional Partners:
LGALS8
Galectin.
    
 
 0.951
MAP1LC3C
Microtubule associated protein 1 light chain 3 gamma.
   
 0.923
RB1CC1
RB1-inducible coiled-coil protein 1 isoform 1.
    
 
 0.919
TBK1
TANK binding kinase 1.
    
 0.849
AZI2
5-azacytidine-induced protein 2 isoform a.
    
 
 0.840
LGALS12
Galectin.
    
 
 0.815
TBKBP1
TANK-binding kinase 1-binding protein 1.
    
 
 0.797
GABARAPL2
Gamma-aminobutyric acid receptor-associated protein-like 2.
   
 0.751
MAP1LC3B
Microtubule-associated proteins 1A/1B light chain 3B.
   
 0.702
SQSTM1
Sequestosome-1 isoform 1.
   
 
 0.670
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.