Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CALCOCO2Calcium binding and coiled-coil domain 2. (446 aa)    
Predicted Functional Partners:
TBK1
TANK binding kinase 1.
    
 0.991
MAP1LC3C
Microtubule associated protein 1 light chain 3 gamma.
   
 0.991
GABARAPL2
Gamma-aminobutyric acid receptor-associated protein-like 2.
   
 0.985
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
   
 0.980
NBR1
NBR1 autophagy cargo receptor.
   
 0.975
MAP1LC3B
Microtubule-associated proteins 1A/1B light chain 3B.
   
 0.973
SQSTM1
Sequestosome-1 isoform 1.
   
 0.967
TAX1BP1
Tax1 binding protein 1.
    
0.964
GABARAP
Gamma-aminobutyric acid receptor-associated protein.
   
 0.960
OPTN
Optineurin.
    
 0.956
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.