STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GEMIN5Gem nuclear organelle associated protein 5. (1507 aa)    
Predicted Functional Partners:
DDX20
DEAD-box helicase 20.
   
 0.997
GEMIN4
Gem nuclear organelle associated protein 4.
   
 0.989
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.980
GEMIN7
Gem-associated protein 7.
    
 0.964
GEMIN2
Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.
    
 0.938
LOC100391187
Uncharacterized protein.
    
 0.914
LOC100385179
Survival motor neuron protein isoform d.
   
 0.909
GEMIN8
Gem-associated protein 8.
    
 0.899
ENSCJAP00000064727
Uncharacterized protein.
    
 0.899
ENSCJAP00000072345
Uncharacterized protein.
    
 0.844
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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